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    <title>Notebooks   </title>
    <link>http://bactra.org/notebooks</link>
    <description>Cosma's Notebooks</description>
    <language>en</language>

  <item>
    <title>Slime Molds, especially &lt;em&gt;Dictyostelium&lt;/em&gt;</title>
    <link>http://bactra.org/notebooks/2009/04/10#slime-molds</link>
    <description>
&lt;P&gt;Like almost everyone else who comes to this from a mathematical background, I
am particularly interested in &lt;em&gt;Dictyostelium&lt;/em&gt;.  Depending on one's point
of view, this is either a single-celled amoebae which can cooperate to form
structures ensuring better dispersal when food gets scarce; or a differentiated
multicellular organism where forming a new organism doesn't require merging two
gametes, but many, without a notion of sex.  Or it's an excitable medium.

&lt;P&gt;See also:
	&lt;a href=&quot;development-bio.html&quot;&gt;Developmental Biology&lt;/a&gt;;
	&lt;a href=&quot;excitable-media.html&quot;&gt;Excitable Media&lt;/a&gt;;
	&lt;a href=&quot;pattern-formation.html&quot;&gt;Pattern Formation&lt;/a&gt;;
	&lt;a href=&quot;self-organization.html&quot;&gt;Self-Organization&lt;/a&gt;


&lt;ul&gt;Recommended:
	&lt;li&gt;&lt;a href=&quot;j-t-bonner.html&quot;&gt;John Tyler Bonner&lt;/a&gt;
		&lt;ul&gt;
		&lt;li&gt;&lt;cite&gt;The Cellular Slime Molds&lt;/cite&gt;
		&lt;li&gt;&lt;citE&gt;The Social Amoebae: The Biology of Cellular Slime
Molds&lt;/cite&gt; [&lt;a href=&quot;http://press.princeton.edu/titles/8952.html&quot;&gt;Blurb, ch. 1&lt;/a&gt;.  My &lt;a href=&quot;../weblog/algae-2009-02.html#bonner&quot;&gt;mini-review&lt;/a&gt;]
		&lt;/ul&gt;
	&lt;li&gt;Owen M. Gilbert, David C. Queller and Joan E. Strassmann,
&quot;Discovery of a large clonal patch of a social amoeba: implications for
social evolution&quot;, &lt;a href=&quot;http://dx.doi.org/10.1111/j.1365-294X.2009.04108.x&quot;&gt;&lt;cite&gt;Molecular Ecology&lt;/cite&gt;
&lt;strong&gt;18&lt;/strong&gt; (2009): 1273--1281&lt;/a&gt; [&lt;a href=&quot;http://www.ruf.rice.edu/~evolve/pdf/2009/gilbert_MolEcol2009.pdf&quot;&gt;Reprint&lt;/a&gt;]
	&lt;li&gt;Satoshi Sawai, Peter A. Thomason and Edward C. Cox, &quot;An
autoregulatory circuit for long-range self-organization
in &lt;em&gt;Dictyostelium&lt;/em&gt; cell populations&quot;, &lt;a
href=&quot;http://dx.doi.org/10.1038/nature03228&quot;&gt;&lt;cite&gt;Nature&lt;/cite&gt; &lt;strong&gt;433&lt;/strong&gt;
(2005): 323--326&lt;/a&gt;
	&lt;/ul&gt;

&lt;ul&gt;To read:
	&lt;li&gt;Richard H. Kessin, &lt;cite&gt; Dictyostelium: Evolution, Cell Biology,
and the Development of Multicellularity&lt;/cite&gt;
[&lt;a href=&quot;http://www.cambridge.org/0521583640&quot;&gt;Blurb&lt;/a&gt;]
	&lt;li&gt;Wouter-Jan Rappel, Alastair Nicol, Armand Sarkissian, Herbert
Levine and William F. Loomis, &quot;Self-Organized Vortex State in Two-Dimensional
&lt;em&gt;Dictyostelium&lt;/em&gt; Dynamics,&quot; &lt;a
href=&quot;http://arxiv.org/abs/patt-sol/9811001&quot;&gt;patt-sol/9811001&lt;/a&gt;
	&lt;/ul&gt;
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